STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0217ABC transporter, ATP binding component. (585 aa)    
Predicted Functional Partners:
SYNW2110
Putative ABC transporter, multidrug efflux family.
  
 
   0.820
SYNW1335
Possible ABC transporter component, ATP binding protein.
  
     0.735
SYNW1858
Putative multidrug efflux ABC transporter.
  
 0.728
SYNW2234
Possible ABC transporter, ATP-binding component.
  
     0.727
SYNW1169
Putative phosphonate ABC transporter.
  
     0.720
SYNW0211
Possible ABC transporter, ATP-binding component.
 
     0.664
SYNW0219
Probable deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
   
   0.655
SYNW0959
Putative multidrug efflux ABC transporter.
 
 
   0.612
SYNW0218
NUDIX hydrolase.
  
 
 0.601
SYNW0411
Putative multidrug efflux ABC transporter.
 
 
0.513
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.