STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degTPutative pleiotropic regulatory protein; Members of the DegT/DnrJ/EryC1/StrS family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions; Belongs to the DegT/DnrJ/EryC1 family. (411 aa)    
Predicted Functional Partners:
SYNW0240
Probable oxidoreductase.
 
  
 0.823
SYNW0461
Putative nucleotide sugar epimerase/dehydratase.
 
  
 0.808
SYNW0221
Conserved hypothetical protein.
  
    0.755
rfbB
dTDP-glucose-4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.698
SYNW0443
Possible oxidoreductase, GFO/Idh/MocA family protein.
 
  
 0.677
SYNW0790
Putative oxidoreductase.
 
  
 0.575
SYNW0311
Conserved hypothetical protein.
  
  
 0.566
SYNW1652
Galactosyl-1-phosphate transferase.
  
 0.564
SYNW0450
Putative sugar-phosphate nucleotide transferase.
  
  
 0.542
SYNW0222
Conserved hypothetical protein.
       0.524
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.