STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0257Conserved hypothetical protein. (101 aa)    
Predicted Functional Partners:
SYNW0258
Conserved hypothetical protein; Predicted membrane protein.
 
     0.902
SYNW0256
Conserved hypothetical protein.
       0.726
SYNW1781
Conserved hypothetical protein.
  
     0.717
SYNW0775
Conserved hypothetical protein; Unclear why Thermosynechococcus database called it a response regulator.
  
     0.706
SYNW0813
Conserved hypothetical protein.
  
     0.698
SYNW1488
Conserved hypothetical protein.
  
     0.690
SYNW2131
Conserved hypothetical protein.
  
     0.685
SYNW1804
Conserved hypothetical protein.
  
     0.684
SYNW0133
Conserved hypothetical.
  
     0.679
SYNW0707
Conserved hypothetical protein.
  
     0.661
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.