STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0312Conserved hypothetical protein. (387 aa)    
Predicted Functional Partners:
SYNW1078
Conserved hypothetical protein.
 
 
 0.836
SYNW1251
Conserved hypothetical protein.
  
     0.720
rpaC
Putative regulator; Citation: Emlyn-Jones et al. (1999) Molecular Microbiology 33:1050-1058.
  
     0.708
chpX
Putative CO2 hydration protein ChpX.
  
     0.702
kaiA
Possible circadian clock protein KaiA [UI:98397326]; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of KaiC. In contrast, the presence of KaiB in the complex decreases the phosphorylation status of KaiC, suggesting that KaiB acts by antagonizing the interaction between KaiA and KaiC. A KaiA dimer is suffic [...]
  
     0.694
SYNW1624
Conserved hypothetical protein; Changed start to match that seen in other orgs.
 
     0.691
SYNW2061
Conserved hypothetical protein.
  
     0.659
SYNW0300
Conserved hypothetical protein.
  
     0.646
SYNW1891
Conserved hypothetical protein.
  
     0.623
SYNW0311
Conserved hypothetical protein.
  
 
 0.592
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.