STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0399Possible polysaccharide export protein. (661 aa)    
Predicted Functional Partners:
SYNW0400
Similar to capsule polysaccharide protein kpsS; Possible polysaccharide modification protein.
   
 0.958
SYNW0640
Possible ABC transporter involved in polysaccharide efflux.
 
  
 0.926
SYNW0639
Possible ABC transporter involved in polysaccharide efflux.
 
  
 0.925
SYNW0620
Possible ABC transporter involved in polysaccharide efflux.
 
  
 0.907
SYNW0517
Hypothetical.
  
     0.718
SYNW0398
Putative acylneuraminate cytidylyltransferase.
       0.640
SYNW0079
Hypothetical.
  
     0.634
SYNW1829
Conserved hypothetical protein.
  
     0.614
SYNW0185
Conserved hypothetical.
  
    0.545
SYNW0395
Conserved hypothetical protein.
     
 0.536
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.