STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0461Putative nucleotide sugar epimerase/dehydratase. (638 aa)    
Predicted Functional Partners:
SYNW0419
Conserved hypothetical protein; Predicted membrane protein.
  
  
 0.872
manC
GDP-mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.868
SYNW0446
Putative aminotransferase (degT family); Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.828
SYNW0460
Putative glycosyltransferase family 4 protein.
 
   
 0.824
degT
Putative pleiotropic regulatory protein; Members of the DegT/DnrJ/EryC1/StrS family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.808
SYNW0645
Putative glycosyltransferase family 2 protein.
  
  
 0.777
SYNW0451
Putative O-acetyltransferase.
  
  
 0.752
gmd
GDP-D-mannose 4, 6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.741
SYNW0459
Possible UDP-glucose 4-epimerase.
 
  
 0.680
SYNW0311
Conserved hypothetical protein.
  
  
 0.663
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.