STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrRPossible pyrimidine operon regulatory protein PyrR/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. (258 aa)    
Predicted Functional Partners:
SYNW1764
Putative dihydroorotase.
 
 
 0.985
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
 
 0.984
pyrB
Aspartate carbamoyltransferase; Putative assignment; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 
 0.950
pyrH,smbA
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.940
SYNW1125
Putative uracil phosphoribosyltransferase.
     
 0.929
surE
Survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.920
SYNW1344
Possible phosphoribulokinase/uridine kinase family protein.
     
 0.917
codA
Possible cytosine deaminase.
    
 0.902
SYNW2390
Putative alkaline phosphatase/5' nucleotidase; Belongs to the 5'-nucleotidase family.
     
 0.900
carB
Carbamoyl phosphate synthetase, large subunit; Belongs to the CarB family.
  
  
 0.894
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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