STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0619Sodium:solute symporter family, possibly glucose transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (587 aa)    
Predicted Functional Partners:
SYNW1956
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.651
SYNW0618
Conserved hypothetical protein.
 
     0.619
SYNW0326
Conserved hypothetical protein.
  
     0.522
SYNW2339
Conserved hypothetical protein.
 
     0.520
apt
Possible Phosphoribosyl transferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.515
SYNW1823
Conserved hypothetical protein.
  
     0.493
acs
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.461
SYNW0843
ABC transporter for amino acids, ATP binding component.
  
  
 0.458
ycf33
Conserved hypothetical protein; Predicted membrane protein.
  
     0.451
gltA
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.416
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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