STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metBPutative cystathionine gamma-synthase. (380 aa)    
Predicted Functional Partners:
SYNW0674
Possible cystathionine gamma-synthase.
 
  
 
0.983
cysK1
O-acetylserine (thiol)-lyase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.982
metH
Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.978
cysK2
O-acetylserine (thiol)-lyase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.965
SYNW0687
Putative thioredoxin reductase.
  
 
 0.935
aspC
Aminotransferases class-I; Possible role in phosphonate metabolism.
  
 
 0.916
ilvE
Putative branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 0.913
metG
Putative methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.910
cysD-2
Putative O-Acetyl homoserine sulfhydrylase.
 
 
0.873
cysE
Serine acetyltransferase.
  
 
 0.870
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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