STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0749Possible glucose 6-phosphate dehydrogenase effector OpcA. (428 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.866
cbiA,cobB
Putative Cobyrinic acid a,c-diamide synthase; BELONGS TO THE SIRTUIN FAMILY; Citation: Tsang and Escalante-Semerena (1996) J. Bacteriol. 178:7016-7019.
       0.766
SYNW1781
Conserved hypothetical protein.
  
     0.752
SYNW1471
Conserved hypothetical protein.
  
     0.749
SYNW0747
Possible acylphosphatase.
       0.746
SYNW1864
Conserved hypothetical protein.
  
     0.740
SYNW2038
Conserved hypothetical protein.
  
     0.730
SYNW0621
Conserved hypothetical protein.
  
     0.720
SYNW0908
Conserved hypothetical protein.
  
     0.718
recO
Possible Recombination protein O (RecO); Involved in DNA repair and RecF pathway recombination.
 
     0.715
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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