STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0808Two-component response regulator. (241 aa)    
Predicted Functional Partners:
SYNW0807
Two-component sensor histidine kinase.
 
 0.997
phoR
Two-component sensor histidine kinase, phosphate sensing.
 
 
 0.854
SYNW1598
Missing some conserved amino acids thought to be involved in response regulator functioning.
  
     0.756
sasA
Two-component sensor histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs.
 
 0.726
SYNW0246
Two-component sensor histidine kinase.
 
 
 0.653
SYNW0806
Conserved hypothetical protein.
     
 0.570
nblS
Two-component sensor histidine kinase.
 
 
 0.556
SYNW0809
Conserved hypothetical protein.
       0.529
SYNW2043
Conserved hypothetical protein.
  
 
 0.478
SYNW0311
Conserved hypothetical protein.
  
  
 0.444
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.