STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hli4Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219. (84 aa)    
Predicted Functional Partners:
SYNW0325
Conserved hypothetical protein.
  
     0.753
SYNW1258
Conserved hypothetical protein.
  
     0.749
SYNW1231
Conserved hypothetical protein.
  
     0.725
SYNW0815
Conserved hypothetical protein.
 
     0.693
ubiH
Possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase; UbiH.
 
     0.689
SYNW1488
Conserved hypothetical protein.
  
     0.675
nrdJ
Ribonucleotide reductase (Class II); Citation: Gleason and Olszewski (2002) J. Bacteriol. 184:6544-6550.
  
     0.674
SYNW0813
Conserved hypothetical protein.
  
     0.671
SYNW0133
Conserved hypothetical.
  
     0.663
SYNW1880
Conserved hypothetical protein.
  
     0.663
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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