STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0818Conserved hypothetical protein; Predicted membrane protein. (218 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
  
 
 0.843
SYNW2259
Conserved hypothetical protein.
  
     0.771
SYNW1615
Conserved hypothetical protein; Predicted membrane protein; Belongs to the BI1 family.
  
     0.765
SYNW0333
Conserved hypothetical protein.
  
     0.762
SYNW0775
Conserved hypothetical protein; Unclear why Thermosynechococcus database called it a response regulator.
  
     0.759
SYNW0578
Conserved hypothetical protein.
  
     0.742
SYNW0812
Conserved hypothetical protein.
  
     0.737
SYNW1781
Conserved hypothetical protein.
  
     0.734
SYNW0265
Conserved hypothetical protein.
  
    0.719
SYNW0813
Conserved hypothetical protein.
 
     0.719
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.