STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0835Probable oxidoreductase. (547 aa)    
Predicted Functional Partners:
SYNW2483
Conserved hypothetical protein.
    
 0.843
SYNW1428
Hypothetical.
 
     0.499
SYNW0834
Conserved hypothetical protein.
       0.459
SYNW0311
Conserved hypothetical protein.
   
 0.429
SYNW0831
Conserved hypothetical protein.
       0.429
rsfS
Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.429
SYNW0833
Conserved hypothetical protein; Predicted membrane protein.
       0.429
SYNW1273
possible-TPR Domain containing protein.
    
 0.427
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
     
 0.422
SYNW0306
Conserved hypothetical protein.
  
     0.404
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.