STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0838Conserved hypothetical protein. (401 aa)    
Predicted Functional Partners:
SYNW0839
Putative sulfate transporter.
     
 0.693
SYNW2371
Possible reductase.
 
 
 0.671
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
     
 0.670
SYNW0837
Conserved hypothetical protein.
       0.586
SYNW0687
Putative thioredoxin reductase.
 
 
 0.579
guaB
Putative IMP dehydrogenase.
  
 0.577
SYNW1415
ABC transporter, nitrate-like substrate binding protein.
  
  
 0.519
SYNW2487
Putative cyanate ABC transporter.
  
  
 0.519
SYNW2372
Conserved hypothetical protein; Belongs to the pirin family.
  
  
 0.506
menE
Probable O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase).
     
 0.495
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.