STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0896Conserved hypothetical. (377 aa)    
Predicted Functional Partners:
SYNW0895
Hypothetical.
       0.773
SYNW0930
Conserved hypothetical protein.
  
     0.758
SYNW2397
Conserved hypothetical protein.
  
     0.700
SYNW1642
Conserved hypothetical protein.
  
     0.686
SYNW0812
Conserved hypothetical protein.
  
     0.677
SYNW1781
Conserved hypothetical protein.
  
     0.644
SYNW1619
Conserved hypothetical protein.
  
     0.640
SYNW1981
Possible ferredoxin [2Fe-2S].
  
     0.637
recO
Possible Recombination protein O (RecO); Involved in DNA repair and RecF pathway recombination.
  
     0.613
SYNW2387
Conserved hypothetical protein; Belongs to the SprT family.
  
     0.613
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.