STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0924ABC transporter, multidrug efflux family. (598 aa)    
Predicted Functional Partners:
SYNW1285
ABC transporter possibly for trehalose/maltose, ATP binding component.
 
    
0.826
pstB
Putative phosphate ABC transporter, ATP binding subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.689
SYNW0925
Possible Na+/H+ antiporter, CPA2 family.
  
   0.672
SYNW1087
ABC-transporter, ATP-binding component.
   
0.552
rbpD
putativeRNA-binding protein RbpD.
  
   0.544
SYNW0926
Similar to membrane bound transcriptional regulator.
  
    0.494
SYNW0311
Conserved hypothetical protein.
  
 0.493
SYNW0411
Putative multidrug efflux ABC transporter.
 
 
0.491
moeB
Molybdopterin biosynthesis protein; Belongs to the HESA/MOEB/THIF family; Citation: Nohno et al. (1988) J. Bacteriol. 170:4097-4102.
  
 0.465
SYNW0193
Putative multidrug efflux ABC transporter.
 
 
0.457
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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