STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0958Similar to leukotoxin secretion protein. (386 aa)    
Predicted Functional Partners:
SYNW0959
Putative multidrug efflux ABC transporter.
 
 
 0.961
SYNW0193
Putative multidrug efflux ABC transporter.
 
 
 0.831
SYNW0411
Putative multidrug efflux ABC transporter.
 
 
 0.800
SYNW2187
Putative RND family outer membrane efflux protein.
 
 
 0.776
SYNW0960
Conserved hypothetical protein.
 
     0.745
swmA
SwmA-cell surface protein required for swimming motility; Citation: Brahamsha (1996) Proc. Natl. Acad. Sci. USA 93:6504-6509.
  
  
 0.681
expE1
Putative secreted calcium-binding protein.
  
  
 0.654
SYNW2409
Putative hemolysin-type calcium-binding protein; similar to HlyA.
  
  
 0.646
SYNW0192
Conserved hypothetical protein.
 
     0.586
SYNW0408
Conserved hypothetical protein.
 
     0.521
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.