STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0967Conserved hypothetical protein. (352 aa)    
Predicted Functional Partners:
SYNW0968
Hypothetical.
       0.773
SYNW1766
Conserved hypothetical protein.
  
     0.731
SYNW1111
Conserved hypothetical protein.
  
    0.661
SYNW1959
Conserved hypothetical protein.
  
     0.633
SYNW2125
Conserved hypothetical protein; Predicted membrane protein.
 
     0.627
SYNW1367
Carotenoid binding protein; Kerfeld et al., Structure (Camb) 2003 11(1), 55-65; Belongs to the orange carotenoid-binding protein family.
  
     0.622
SYNW1477
Conserved hypothetical protein.
  
     0.620
SYNW0265
Conserved hypothetical protein.
 
     0.599
SYNW0139
Conserved hypothetical protein.
  
     0.591
kprS
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
       0.576
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.