STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1001Conserved hypothetical protein. (215 aa)    
Predicted Functional Partners:
glgA
Putative glycogen synthase (glgA); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
       0.773
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
       0.773
SYNW1507
Conserved hypothetical protein.
  
     0.767
SYNW0133
Conserved hypothetical.
  
     0.765
SYNW1231
Conserved hypothetical protein.
  
     0.762
SYNW0332
Conserved hypothetical protein.
  
     0.752
SYNW0325
Conserved hypothetical protein.
  
     0.731
SYNW1488
Conserved hypothetical protein.
  
     0.714
SYNW2277
Conserved hypothetical protein; Predicted membrane protein.
  
     0.704
SYNW0717
Conserved hypothetical protein.
  
     0.699
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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