STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1017Conserved hypothetical protein; Similar to orf2, strain WH7803. (105 aa)    
Predicted Functional Partners:
dnaQ
Possible DNA polymerase III, epsilon subunit.
     
 0.877
SYNW1019
Possible transcriptional regulator.
     
 0.734
SYNW0465
Conserved hypothetical protein.
      
 0.630
SYNW0470
Hypothetical.
      
 0.630
SYNW1014
Conserved hypothetical protein.
       0.491
SYNW1015
Putative bacterioferritin comigratory protein; Possible thiol peroxidase.
       0.491
SYNW1018
ABC transporter, substrate binding protein, phosphate; Belongs to the PstS family.
       0.471
gmd
GDP-D-mannose 4, 6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
      
 0.437
fcl
Putative GDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
      
 0.437
SYNW0919
Similar to mannose-6-phosphate isomerase WbpW.
      
 0.437
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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