STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1089Possible glycosyltransferase. (310 aa)    
Predicted Functional Partners:
SYNW0419
Conserved hypothetical protein; Predicted membrane protein.
 
  
 0.643
PcyA
Ferredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
 
     0.615
SYNW0337
Conserved hypothetical protein.
  
     0.595
SYNW1087
ABC-transporter, ATP-binding component.
 
     0.590
SYNW1088
Conserved hypothetical protein.
       0.588
SYNW1081
Conserved hypothetical protein.
  
     0.585
rps2,
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
       0.542
SYNW0903
Conserved hypothetical protein; Predicted membrane protein.
  
     0.534
SYNW1086
ABC-transporter, membrane spanning component.
  
    0.529
manC
GDP-mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.528
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.