STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1172Hypothetical. (144 aa)    
Predicted Functional Partners:
SYNW1173
Uracil-DNA glycosylase.
       0.572
aspC
Aminotransferases class-I; Possible role in phosphonate metabolism.
       0.553
gcpE
GcpE protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.523
SYNW1167
Conserved hypothetical protein; Possible role in phosphonate metabolism.
       0.500
SYNW1168
Putative phosphonate ABC transporter.
       0.500
SYNW1169
Putative phosphonate ABC transporter.
       0.500
SYNW1170
Putative phosphonate binding protein for ABC transporter.
       0.500
SYNW1175
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
       0.452
SYNW1166
Conserved hypothetical protein; Possible role in phosphonate metabolism.
       0.446
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.