STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1192Conserved hypothetical protein. (112 aa)    
Predicted Functional Partners:
SYNW1191
TerC family protein.
       0.797
SYNW1193
Hypothetical; Possible similarity to uncalled orf in PCC6803.
       0.773
SYNW1703
Conserved hypothetical protein.
  
     0.757
SYNW1891
Conserved hypothetical protein.
  
     0.749
SYNW1643
Conserved hypothetical protein.
  
     0.746
SYNW0251
Conserved hypothetical protein.
  
     0.740
pex
Possible Pex protein.
  
     0.726
SYNW1221
Conserved hypothetical protein.
  
     0.723
chpX
Putative CO2 hydration protein ChpX.
  
     0.721
SYNW2264
Conserved hypothetical.
  
     0.713
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.