STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1203Conserved hypothetical protein; Predicted membrane protein. (102 aa)    
Predicted Functional Partners:
SYNW1204
Conserved hypothetical protein; Predicted membrane protein.
 
    
0.841
SYNW1205
Conserved hypothetical protein.
  
    0.800
zam
Putative acetazolamide conferring resistance protein Zam; Citation: Beuf et al. (1995) Plant Mol Biol. 27:779-88; Belongs to the RNR ribonuclease family.
       0.624
SYNW1200
Conserved hypothetical protein; Similar orf in MIT9313.
       0.621
ubiX
Putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.593
SYNW1199
Conserved hypothetical protein.
       0.533
SYNW1206
Possible single-stranded-DNA-specific exonuclease.
       0.461
pmbA
Possible modulator of DNA gyrase.
       0.422
PNIL34,AT103
Phytochrome-regulated gene homologue; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
       0.420
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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