STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1231Conserved hypothetical protein. (530 aa)    
Predicted Functional Partners:
SYNW1027
Conserved hypothetical protein; STAS domain; Belongs to the anti-sigma-factor antagonist family.
  
    0.958
SYNW1232
Possible type 3 alternative RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
  
  
 0.823
SYNW1850
Conserved hypothetical protein.
 
     0.774
SYNW0133
Conserved hypothetical.
  
     0.773
SYNW2277
Conserved hypothetical protein; Predicted membrane protein.
  
     0.773
SYNW2525
Conserved hypothetical protein.
  
     0.765
SYNW1488
Conserved hypothetical protein.
  
     0.763
SYNW1001
Conserved hypothetical protein.
  
     0.762
SYNW0870
Conserved hypothetical.
  
     0.761
SYNW1190
Conserved hypothetical.
  
     0.760
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.