STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1283ABC transporter for possibly for trehalose/maltose, membrane component. (288 aa)    
Predicted Functional Partners:
SYNW1284
ABC transporter, likely for trehalose/maltose, membrane component.
 0.999
SYNW1285
ABC transporter possibly for trehalose/maltose, ATP binding component.
 
 0.999
SYNW1282
ABC transporter, likely sugar solute binding protein.
 
 0.994
SYNW1929
Possible ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.971
SYNW0731
Putative permease protein of sugar ABC transporter.
 
 0.965
SYNW0125
Putative sugar-binding protein.
 
 
 0.881
ggpS
Putative glucosyl-glycerol-phosphate synthase [UI:98406036]; Citation: Zuther et al. (1998) J. Bacteriol. 180:4843-4849.
     
 0.821
SYNW1286
ABC transporter, substrate binding protein component, possibly phosphate.
  
  
 0.778
rpl28,
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
     
 0.683
SYNW1280
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein.
       0.613
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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