STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1296Conserved hypothetical protein. (154 aa)    
Predicted Functional Partners:
SYNW1297
Conserved hypothetical protein.
       0.786
SYNW1624
Conserved hypothetical protein; Changed start to match that seen in other orgs.
  
     0.774
chpX
Putative CO2 hydration protein ChpX.
  
     0.771
SYNW1850
Conserved hypothetical protein.
  
     0.771
SYNW1891
Conserved hypothetical protein.
  
     0.771
SYNW1251
Conserved hypothetical protein.
  
     0.770
SYNW0300
Conserved hypothetical protein.
  
     0.767
rpaC
Putative regulator; Citation: Emlyn-Jones et al. (1999) Molecular Microbiology 33:1050-1058.
  
     0.767
ftrV
Putative ferredoxin-thioredoxin reductase, variable chain; Citation: Szekeres et al. (1991) J. Bacteriol. 173:1821-1823.
  
     0.763
SYNW1643
Conserved hypothetical protein.
  
     0.762
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.