STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1369Conserved hypothetical protein. (106 aa)    
Predicted Functional Partners:
SYNW1367
Carotenoid binding protein; Kerfeld et al., Structure (Camb) 2003 11(1), 55-65; Belongs to the orange carotenoid-binding protein family.
 
 
 
 0.927
SYNW1477
Conserved hypothetical protein.
  
     0.719
SYNW2277
Conserved hypothetical protein; Predicted membrane protein.
  
     0.704
kaiA
Possible circadian clock protein KaiA [UI:98397326]; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of KaiC. In contrast, the presence of KaiB in the complex decreases the phosphorylation status of KaiC, suggesting that KaiB acts by antagonizing the interaction between KaiA and KaiC. A KaiA dimer is suffic [...]
  
     0.702
SYNW2220
Conserved hypothetical protein.
  
     0.700
ycf33
Conserved hypothetical protein; Predicted membrane protein.
  
     0.683
SYNW1368
Possible beta-carotene ketolase.
       0.645
SYNW1959
Conserved hypothetical protein.
  
     0.634
SYNW2125
Conserved hypothetical protein; Predicted membrane protein.
  
     0.614
SYNW1800
Conserved hypothetical protein.
  
     0.609
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.