STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1422Conserved hypothetical protein; Similar to selenophosphate synthetase. (325 aa)    
Predicted Functional Partners:
SYNW1423
Conserved hypothetical protein.
 
     0.956
SYNW1424
Conserved hypothetical protein; Biotin synthase-like domain containing protein.
 
     0.956
SYNW1425
Probable nitrilase.
 
   
 0.952
SYNW1426
Conserved hypothetical protein.
 
   
 0.948
SYNW1421
Conserved hypothetical protein.
 
     0.919
SYNW1427
Predicted flavoprotein involved in K+ transport (COG2072).
 
   
 0.889
SYNW1420
Conserved hypothetical protein.
       0.518
SYNW1419
Conserved hypothetical protein.
       0.506
metH
Putative methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
      
 0.414
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.