STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1425Probable nitrilase. (338 aa)    
Predicted Functional Partners:
SYNW1423
Conserved hypothetical protein.
 
     0.954
SYNW1424
Conserved hypothetical protein; Biotin synthase-like domain containing protein.
 
     0.954
SYNW1422
Conserved hypothetical protein; Similar to selenophosphate synthetase.
 
   
 0.952
SYNW1426
Conserved hypothetical protein.
 
     0.943
SYNW1956
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.915
SYNW1421
Conserved hypothetical protein.
 
  
 0.912
glnA
Glutamine synthetase, glutamate--ammonia ligase.
    
 0.911
nirA
Ferredoxin--nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.902
SYNW0747
Possible acylphosphatase.
     
  0.900
SYNW1427
Predicted flavoprotein involved in K+ transport (COG2072).
 
  
 0.860
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.