STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1427Predicted flavoprotein involved in K+ transport (COG2072). (436 aa)    
Predicted Functional Partners:
SYNW1426
Conserved hypothetical protein.
 
     0.896
SYNW1422
Conserved hypothetical protein; Similar to selenophosphate synthetase.
 
   
 0.889
SYNW1423
Conserved hypothetical protein.
 
     0.889
SYNW1424
Conserved hypothetical protein; Biotin synthase-like domain containing protein.
 
     0.889
SYNW1421
Conserved hypothetical protein.
 
     0.871
SYNW1425
Probable nitrilase.
 
  
 0.860
SYNW0809
Conserved hypothetical protein.
    
 
 0.703
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
   
   0.670
atpC
ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.547
SYNW1078
Conserved hypothetical protein.
    
 
 0.466
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.