STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1492Predicted acyl esterase (COG2936). (528 aa)    
Predicted Functional Partners:
SYNW1491
Conserved hypothetical.
       0.806
SYNW1489
Conserved hypothetical protein; Predicted membrane protein.
 
     0.658
SYNW0778
Conserved hypothetical.
  
     0.655
SYNW1166
Conserved hypothetical protein; Possible role in phosphonate metabolism.
  
     0.653
SYNW0170
Conserved hypothetical protein.
  
     0.647
SYNW1490
Conserved hypothetical.
       0.587
SYNW1167
Conserved hypothetical protein; Possible role in phosphonate metabolism.
  
     0.545
SYNW2220
Conserved hypothetical protein.
  
     0.530
SYNW1484
Lipase family protein.
 
   
 0.506
SYNW2217
Conserved hypothetical protein; Homologs in MED4 and MIT9313, PCC6803, and PCC7120 predicted membrane protein.
  
     0.502
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.