STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1593Conserved hypothetical protein. (833 aa)    
Predicted Functional Partners:
SYNW1078
Conserved hypothetical protein.
  
 
 0.930
SYNW1803
Conserved hypothetical protein; Predicted membrane protein.
  
 
   0.720
SYNW0902
Conserved hypothetical protein.
  
     0.683
SYNW2061
Conserved hypothetical protein.
  
     0.664
SYNW2505
Conserved hypothetical protein.
  
     0.659
SYNW1594
Conserved hypothetical protein.
       0.642
SYNW1595
Hypothetical.
       0.642
SYNW1729
Conserved hypothetical protein.
  
     0.638
SYNW0564
Conserved hypothetical protein.
  
     0.620
SYNW0170
Conserved hypothetical protein.
  
     0.586
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.