STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoH,psiHPhoH-like phosphate starvation-inducible protein. (331 aa)    
Predicted Functional Partners:
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.920
rps16,
30S Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
       0.815
recO
Possible Recombination protein O (RecO); Involved in DNA repair and RecF pathway recombination.
  
    0.756
ffh
Signal recognition particle protein (SRP54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
 
     0.716
rsfA
Putative glycosyltransferase.
   
  
 0.631
SYNW1658
Conserved hypothetical.
      
 0.630
SYNW1659
Conserved hypothetical protein [similar to C-terminal end of type I restriction enzyme HsdR].
      
 0.630
SYNW1947
Conserved hypothetical protein.
      
 0.630
SYNW1615
Conserved hypothetical protein; Predicted membrane protein; Belongs to the BI1 family.
       0.627
SYNW1944
Conserved hypothetical protein.
      
 0.590
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.