STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1637Conserved hypothetical protein. (483 aa)    
Predicted Functional Partners:
codA
Possible cytosine deaminase.
 
     0.930
SYNW1639
Conserved hypothetical.
       0.782
glcE
Putative glycolate oxidase subunit GlcE; synonym:(S)-2-hydroxy-acid oxidase.
  
     0.715
SYNW1739
Creatininase.
     0.693
SYNW0163
Putative glycolate oxidase subunit (Fe-S) protein.
 
  
 0.644
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
     
 0.636
miaB
2-methylthioadenine synthetase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.550
ddlB
D-alanine--D-alanine ligase; Cell wall formation.
     
 0.487
SYNW1642
Conserved hypothetical protein.
       0.438
SYNW1643
Conserved hypothetical protein.
       0.433
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.