STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbXProbable RuBisCo-expression protein CbbX. (301 aa)    
Predicted Functional Partners:
SYNW1708
Conserved hypothetical protein.
       0.775
SYNW0877
Putative histone deacetylase/AcuC/AphA family protein.
   
 0.697
chpX
Putative CO2 hydration protein ChpX.
       0.697
ndhD2
NADH dehydrogenase I chain 4 (or M).
       0.697
ndhF1
NADH dehydrogenase I chain 5 (or L).
       0.692
dnaN
DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.650
SYNW1953
Putative glycerol kinase; Belongs to the FGGY kinase family.
   
  0.608
SYNW1078
Conserved hypothetical protein.
    
 0.602
SYNW0329
ABC transporter, ATP binding protein.
     
 0.596
holB
DNA polymerase III, delta prime subunit.
   
  0.586
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.