STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1749Possible methyltransferase. (214 aa)    
Predicted Functional Partners:
cobO
Possible cob(I)alamin adenosyltransferase; Citation: Lundrigan and Kadner (1989) J. Bacteriol. 171:154-161; Fonseca and Escalante-Semerena (2001) J. Biol. Chem. 276:32101-32108.
       0.811
SYNW1748
Phage integrase family; Conserved in three marine cyanobacterial genomes. in addition to BLAST hits contains the applicable subsitutions in the R-H-R-Y motif identified by Nunes-Duby et al 1998.
       0.801
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.630
ilvB
Acetolactate synthase; Belongs to the TPP enzyme family.
     
 0.453
SYNW1745
Conserved hypothetical protein.
       0.451
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.