STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1762Possible membrane associated protease. (422 aa)    
Predicted Functional Partners:
ftsI
Putative peptidoglycan synthetase (pbp transpeptidase domain).
 
     0.699
SYNW1764
Putative dihydroorotase.
  
    0.611
SYNW1761
Conserved hypothetical.
       0.608
cobC
Putative alpha-ribazole-5'-P phosphatase; Phosphatase involved in the assembly of the nucleotide loop of cobalamin; Citation: O'Toole et al. (1994) J. Biol. Chem. 269:26503-26511; Belongs to the phosphoglycerate mutase family.
  
    0.582
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
    0.540
SYNW1121
Conserved hypothetical protein.
 
     0.517
SYNW1758
Conserved hypothetical protein.
 
     0.464
SYNW1857
Putative multidrug efflux ABC transporter.
   
  
 0.443
SYNW1779
Conserved hypothetical protein.
  
     0.440
SYNW1067
Conserved hypothetical protein.
  
     0.432
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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