STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1922Putative assignment; Belongs to the AspA/AstE family. Aspartoacylase subfamily. (303 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Putative assignment; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.900
SYNW0834
Conserved hypothetical protein.
     
  0.900
aspC
Aminotransferases class-I; Possible role in phosphonate metabolism.
     
  0.900
purA,adeK
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
  0.900
nadB
Putative L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.900
yccC
Putative L-asparaginase.
     
  0.900
asnB
Putative asparagine synthetase protein.
     
  0.900
pyrB-2
Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
     
  0.900
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.900
lysC
Aspartate kinase; Putative assignment; alpha and beta subunits, and additional region with homology to beta subunit (BY SIMILARITY).
    
  0.808
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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