STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1935Conserved hypothetical protein. (134 aa)    
Predicted Functional Partners:
SYNW1936
Putative sulfate transporter.
       0.773
SYNW1818
Conserved hypothetical protein.
  
     0.729
SYNW0335
YGGT family, conserved hypothetical integral membrane protein.
  
     0.718
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.717
SYNW1889
Conserved hypothetical protein; Predicted membrane protein.
  
     0.700
psbO
Photosystem II manganese-stabilizing polypeptide.
  
     0.696
SYNW0250
Conserved hypothetical protein; Predicted membrane protein.
  
     0.666
SYNW1033
Conserved hypothetical protein.
  
     0.663
SYNW0205
Similar to plant photosystem II stability/assembly factor; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.659
SYNW1312
Conserved hypothetical protein.
  
     0.655
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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