STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcTConserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (197 aa)    
Predicted Functional Partners:
cpcS
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.962
SYNW2025
Putative phycocyanobilin lyase alpha and beta fusion protein; Citation: de Lorimier et al. (1993) Plant Mol. Biol. 21:225-237.
 
   
 0.954
rpcA
R-phycocyanin II alpha chain.
 
   
 0.950
rpcB
R-phycocyanin II beta chain.
 
   
 0.945
cpcS-3
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.928
cpeS
Conserved hypothetical protein CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.889
apcB
Allophycocyanin beta chain.
  
   
 0.864
apcA
Allophycocyanin alpha chain.
  
   
 0.864
apcC
Linker polypeptide, allophycocyanin-associated; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.823
cpeB
C-phycoerythrin class I beta chain.
 
   
 0.812
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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