STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2038Conserved hypothetical protein. (184 aa)    
Predicted Functional Partners:
SYNW2039
Conserved hypothetical protein.
       0.795
SYNW1864
Conserved hypothetical protein.
  
     0.774
recO
Possible Recombination protein O (RecO); Involved in DNA repair and RecF pathway recombination.
  
     0.773
SYNW1024
Conserved hypothetical protein.
  
     0.772
SYNW1471
Conserved hypothetical protein.
  
     0.772
SYNW0707
Conserved hypothetical protein.
  
     0.771
SYNW1781
Conserved hypothetical protein.
  
     0.771
SYNW0908
Conserved hypothetical protein.
  
     0.769
SYNW2332
Conserved hypothetical protein.
  
     0.769
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.767
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.