Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SYNW2046 | SYNW2048 | SYNW2046 | SYNW2048 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.812 |
| SYNW2046 | ppc, | SYNW2046 | SYNW2047 | Conserved hypothetical protein. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.811 |
| SYNW2046 | trpE | SYNW2046 | SYNW2045 | Conserved hypothetical protein. | Anthranilate synthase component I and chorismate binding enzyme. | 0.812 |
| SYNW2048 | SYNW2046 | SYNW2048 | SYNW2046 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.812 |
| SYNW2048 | ppc, | SYNW2048 | SYNW2047 | Conserved hypothetical protein. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.824 |
| SYNW2048 | trpE | SYNW2048 | SYNW2045 | Conserved hypothetical protein. | Anthranilate synthase component I and chorismate binding enzyme. | 0.810 |
| eno | glsF, | SYNW2348 | SYNW2132 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | 0.911 |
| eno | gltA | SYNW2348 | SYNW2275 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.463 |
| eno | pgk, | SYNW2348 | SYNW2329 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.996 |
| eno | pgmI | SYNW2348 | SYNW0519 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoglycerate mutase, co-factor-independent (iPGM); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.990 |
| eno | ppc, | SYNW2348 | SYNW2047 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.955 |
| eno | pykF | SYNW2348 | SYNW1298 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.999 |
| glsF, | eno | SYNW2132 | SYNW2348 | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.911 |
| glsF, | gltA | SYNW2132 | SYNW2275 | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | Citrate synthase; Belongs to the citrate synthase family. | 0.626 |
| glsF, | mqo | SYNW2132 | SYNW1686 | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | Putative malate:quinone oxidoreductase. | 0.523 |
| glsF, | pgk, | SYNW2132 | SYNW2329 | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.581 |
| glsF, | pgmI | SYNW2132 | SYNW0519 | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | Phosphoglycerate mutase, co-factor-independent (iPGM); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.529 |
| glsF, | ppc, | SYNW2132 | SYNW2047 | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.891 |
| glsF, | pykF | SYNW2132 | SYNW1298 | Ferredoxin-dependent glutamate synthase, Fd-GOGAT. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.748 |
| gltA | eno | SYNW2275 | SYNW2348 | Citrate synthase; Belongs to the citrate synthase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.463 |
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