STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2122Conserved hypothetical protein. (246 aa)    
Predicted Functional Partners:
SYNW2121
Hypothetical.
       0.773
cpeE
Possible phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.731
apcE
Anchor polypeptide LCM; Belongs to the phycobilisome linker protein family.
  
     0.728
SYNW2000
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.724
SYNW2025
Putative phycocyanobilin lyase alpha and beta fusion protein; Citation: de Lorimier et al. (1993) Plant Mol. Biol. 21:225-237.
  
     0.723
SYNW1996
Possible Phycobilisome polypeptide.
  
     0.711
SYNW1989
Possible phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.705
SYNW0776
Conserved hypothetical protein.
  
     0.694
cpeC
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.694
mpeC
C-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.692
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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