STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupEPutative hydrogenase accessory protein. (236 aa)    
Predicted Functional Partners:
som
Possible porin; Belongs to the OprB family.
       0.768
hli6
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219.
  
     0.734
psaK
Possible photosystem I reaction center subunit X (PsaK).
  
     0.695
cbiG/cobJ
Bifunctional cbiH protien and PRECORRIN-3B C17-METHYLTRANSFERASE; Citation: Debussche et al. (1993) J. Bacteriol. 175:7430-7440; Roth et al. (1993) J. Bacteriol. 175:3303-3316.
     
 0.685
recO
Possible Recombination protein O (RecO); Involved in DNA repair and RecF pathway recombination.
  
     0.647
SYNW0563
Conserved hypothetical protein.
  
     0.628
SYNW1471
Conserved hypothetical protein.
  
     0.624
SYNW1642
Conserved hypothetical protein.
  
     0.624
SYNW2312
Conserved hypothetical protein.
  
     0.620
SYNW0659
Conserved hypothetical protein.
  
     0.618
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.