STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2161Putative 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (218 aa)    
Predicted Functional Partners:
coaE
Putative dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.903
fabI
Enoyl-[acyl-carrier-protein] reductase.
  
    0.851
fabD
Malonyl coenzyme A-acyl carrier protein transacylase.
  
  
 0.789
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.699
fabB
Putative 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.699
SYNW2160
Conserved hypothetical protein.
       0.697
SYNW1554
Conserved hypothetical protein.
  
     0.627
SYNW2162
Putative bacterioferritin comigratory (BCP) protein; Peroxiredoxin (Prx) family; thio-specific antioxidant protein (TSA)/alkyl hydroperoxide peroxidase C (AhpC) family protein; Citation: Kong et al. (2000) Biochem J. 351:107-14.
       0.576
hupE
Putative hydrogenase accessory protein.
  
     0.545
SYNW1994
Conserved hypothetical protein.
  
     0.536
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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