STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2190Conserved hypothetical protein. (231 aa)    
Predicted Functional Partners:
SYNW1901
Conserved hypothetical protein.
  
     0.770
SYNW1705
Conserved hypothetical protein.
  
     0.768
atp1,
Possible ATP synthase protein 1.
  
     0.767
SYNW0776
Conserved hypothetical protein.
  
     0.767
SYNW0903
Conserved hypothetical protein; Predicted membrane protein.
  
     0.767
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.764
SYNW1864
Conserved hypothetical protein.
  
     0.760
SYNW0578
Conserved hypothetical protein.
  
     0.754
SYNW2503
Conserved hypothetical protein.
  
     0.754
SYNW2043
Conserved hypothetical protein.
  
     0.753
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.