STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2216Conserved hypothetical protein. (389 aa)    
Predicted Functional Partners:
SYNW2217
Conserved hypothetical protein; Homologs in MED4 and MIT9313, PCC6803, and PCC7120 predicted membrane protein.
       0.799
SYNW0337
Conserved hypothetical protein.
 
     0.770
SYNW2215
Conserved hypothetical protein.
       0.725
secE
Putative preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.608
SYNW2214
Conserved hypothetical protein; Belongs to the HesB/IscA family.
       0.595
SYNW1113
Possible permease.
 
     0.571
SYNW0273
Conserved hypothetical protein.
  
     0.566
SYNW1496
Conserved hypothetical protein.
  
     0.535
SYNW1864
Conserved hypothetical protein.
  
     0.535
SYNW1024
Conserved hypothetical protein.
  
     0.525
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.