STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW2369Rubrerythrin. (237 aa)    
Predicted Functional Partners:
SYNW2367
Flavoprotein.
 
  
 0.886
SYNW2368
Putative flavoprotein.
 
   
 0.780
rub
Probable rubredoxin.
 
  
 0.604
SYNW0223
Conserved hypothetical protein.
  
     0.581
SYNW0687
Putative thioredoxin reductase.
 
  
 0.552
SYNW1527
Conserved hypothetical protein.
 
     0.514
SYNW1526
Conserved hypothetical protein; Predicted membrane protein (COG4244).
 
     0.504
ribH
Putative 6,7-dimethyl-8-ribityllumazine synthase or riboflavin synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
   
  
 0.492
SYNW0670
Conserved hypothetical protein.
      
 0.487
SYNW0827
Conserved hypothetical protein.
      
 0.487
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.